Emma is a PhD student in the Centre for Clinical Brain Sciences. She works with the CAMARADES* group and Simons Initiative for the Developing Brain (SIDB) research centre. Her research focuses on developing computational and automated pipelines to synthesise, summarise, and critique evidence from fundamental and preclinical research. She also organises Edinburgh Open Research Initiative (EORI), a grassroots community for promotion and discussion of open research within the University of Edinburgh.
Emma has been using Open Science Framework (OSF) since 2020 to keep on top of various aspects of her research. OSF is a project management tool and workflow system. It provides researchers with a platform to centralize data storage, integration and sharing across the research lifecycle. In doing so, it makes a vital contribution to open science, collaborative working and inclusivity. There is a quality-assurance and screening process, to ensure that the research on OSF stays legitimate.
*CAMARADES: Collaborative Approach to Meta Analysis and Review of Animal Data from Experimental Studies
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OSF has several uses and advantages. It can be overwhelming to know where to start, so Research Data Service organised an OSF Induction Event. During this event, Emma gave a rundown of the key features she makes use of:
Emma organises all her posters and presentations and makes them available on OSF. She created a dedicated Project (called “presentations”) and added herself as a contributor to save and share her work.
The advantage of doing so?
Example: Here is a link to one of Emma's posters, presented at the 2021 European Stroke Organisation Conference. Here is a link to the presentation slides from the 2023 OSF Induction Event.
Emma uses OSF to make study protocols for various research projects – i.e. she documents the research idea before collecting data. For instance, she created a study protocol for her project on developing a machine learning classifier. All the information on this is public, with a DOI and description of the project. It is possible to make tracked amendments, and update it as the project progresses, adding datasets, analyses or publications.
The advantage of doing so?
Example: You can view one of Emma's projects and its associated protocol. The final publication links back to the study protocol and can be found here: Wilson et al. 2023 (CC-BY)
OSF is a great way to organise data that does not make it into a publication. There is a specific amount of OSF-provided storage for each project. In addition, OSF links up with commonly used cloud-storage e.g. Gitlab and OneDrive – more University guidance on how to configure your OSF account is available here. You get a DOI, a unique persistent URL, to enable citing and sharing research materials stored on OSF. This feature was crucial for Emma when she worked on a project during Covid on how to best synthesize evidence in public health emergencies. She collaborated with various librarians in the US to find best practices for synthesizing databases of rapidly emerging evidence – at the height of Covid, more than 10.000 new studies appeared per week. As there was a lot of supplementary material for this review, not everything could be added to the publication. The supplementary material was made available via OSF, with a link in the research paper.
Example: View the publication on synthesizing evidence in public health emergencies, which references OSF supplementary data: Brody et al. 2023 (CC-BY)
OSF has a space for subject-specific pre-print repositories. This is where you can upload preprints and have them undergo a community review. It is a great opportunity to share a manuscript not intended for publication or before publication. In doing so, you can speed up the scholarly communications process, get feedback and track impact. Emma was surprised by the engagement for this – she put a preprint up, and got 650 views. “These things don’t just sit there, people notice them”.
Example: View Emma's preprint, which has received more than 650 views - Hair et al. 2022 (CC-BY)
In fact, manuscripts can be picked up and made publishable. For instance, Emma discovered an undergraduate honours project uploaded as a preprint to OSF. “The project was incredibly relevant to my work and something I had considered doing myself”.Emma decided to reach out to see if the student and their supervisor would be interested in publication and offered to help out. This is still work in progress (at the time of writing).
Overall, Emma has been happy with OSF, and the training and support the platform provides. Any queries that she has had have been resolved in good time.
During the OSF Induction Event, a few key points were brought up by the OSF representative and Research Data Support Team which users at the University of Edinburgh should be aware of:
For any questions on OSF, you can visit the OSF website or contact Research Data Support.
OSF Website Research Data SupportThis case study was written by Dr Sarah Janac, Research Facilitator for the College of Medicine and Veterinary Medicine, and reviewed by Dr Simon Smith, Research Data Support Officer.
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